EHDS Logical Information Models
0.1.0 - ci-build

EHDS Logical Information Models, published by Xt-EHR. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/Xt-EHR/xt-ehr-common/tree/main and changes regularly. See the Directory of published versions

Logical Model: Specimen model

Official URL: https://www.xt-ehr.eu/specifications/fhir/StructureDefinition/EHDSSpecimen Version: 0.1.0
Draft as of 2025-07-25 Computable Name: EHDSSpecimen

EHDS refined base model for A sample to be used for Analysis

Usages:

You can also check for usages in the FHIR IG Statistics

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. EHDSSpecimen 0..* Base Specimen model
Instances of this logical model can be the target of a Reference
... identifier 1..* Identifier An identifier of the specimen which is unique within in a defined scope.
... typeOfSpecies 0..1 CodeableConcept Biologic type of species for laboratory result reports bound to non-human subjects.
Binding Description: (preferred): SNOMED CT
... material 0..1 CodeableConcept Material that forms the specimen.
Binding Description: (preferred): SNOMED CT
... bodySite 0..1 EHDSBodyStructure Anatomic location (body location, laterality) where the material is collected, e.g. Elbow, left
... morphology 0..1 CodeableConcept Morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer.
Binding Description: (preferred): SNOMED CT
... sourceDevice 0..1 CodeableConcept Source device in case the material is not collected directly from the patient but comes from a patient-related object, e.g. a catheter
Binding Description: (preferred): SNOMED CT, EMDN
... collectionProcedure 0..1 EHDSProcedure The procedure that collects the specimen.
... collectionProcedureMethod 0..1 CodeableConcept Collection procedure method
Binding Description: (preferred): SNOMED CT
... receivedDate 0..1 dateTime Date and time that the material is handed over at the laboratory or specimen collection centre.
... subject[x] 0..1 Subject
.... subjectEHDSPatient EHDSPatient
.... subjectEHDSPatientAnimal EHDSPatientAnimal
.... subjectEHDSLocation EHDSLocation
.... subjectEHDSDevice EHDSDevice
.... subjectEHDSSubstance EHDSSubstance
... container 0..* Base The container holding the specimen.
.... specimenQuantity 0..1 Quantity Specimen quantity
.... containerDevice 1..1 EHDSDevice Container device

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
EHDSSpecimen.typeOfSpeciespreferred
EHDSSpecimen.materialpreferred
EHDSSpecimen.morphologypreferred
EHDSSpecimen.sourceDevicepreferred
EHDSSpecimen.collectionProcedureMethodpreferred

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. EHDSSpecimen 0..* Base Specimen model
Instances of this logical model can be the target of a Reference
... identifier 1..* Identifier An identifier of the specimen which is unique within in a defined scope.
... typeOfSpecies 0..1 CodeableConcept Biologic type of species for laboratory result reports bound to non-human subjects.
Binding Description: (preferred): SNOMED CT
... material 0..1 CodeableConcept Material that forms the specimen.
Binding Description: (preferred): SNOMED CT
... bodySite 0..1 EHDSBodyStructure Anatomic location (body location, laterality) where the material is collected, e.g. Elbow, left
... morphology 0..1 CodeableConcept Morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer.
Binding Description: (preferred): SNOMED CT
... sourceDevice 0..1 CodeableConcept Source device in case the material is not collected directly from the patient but comes from a patient-related object, e.g. a catheter
Binding Description: (preferred): SNOMED CT, EMDN
... collectionProcedure 0..1 EHDSProcedure The procedure that collects the specimen.
... collectionProcedureMethod 0..1 CodeableConcept Collection procedure method
Binding Description: (preferred): SNOMED CT
... receivedDate 0..1 dateTime Date and time that the material is handed over at the laboratory or specimen collection centre.
... subject[x] 0..1 Subject
.... subjectEHDSPatient EHDSPatient
.... subjectEHDSPatientAnimal EHDSPatientAnimal
.... subjectEHDSLocation EHDSLocation
.... subjectEHDSDevice EHDSDevice
.... subjectEHDSSubstance EHDSSubstance
... container 0..* Base The container holding the specimen.
.... specimenQuantity 0..1 Quantity Specimen quantity
.... containerDevice 1..1 EHDSDevice Container device

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSetURI
EHDSSpecimen.typeOfSpeciespreferred
EHDSSpecimen.materialpreferred
EHDSSpecimen.morphologypreferred
EHDSSpecimen.sourceDevicepreferred
EHDSSpecimen.collectionProcedureMethodpreferred
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. EHDSSpecimen 0..* Base Specimen model
Instances of this logical model can be the target of a Reference
... identifier 1..* Identifier An identifier of the specimen which is unique within in a defined scope.
... typeOfSpecies 0..1 CodeableConcept Biologic type of species for laboratory result reports bound to non-human subjects.
Binding Description: (preferred): SNOMED CT
... material 0..1 CodeableConcept Material that forms the specimen.
Binding Description: (preferred): SNOMED CT
... bodySite 0..1 EHDSBodyStructure Anatomic location (body location, laterality) where the material is collected, e.g. Elbow, left
... morphology 0..1 CodeableConcept Morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer.
Binding Description: (preferred): SNOMED CT
... sourceDevice 0..1 CodeableConcept Source device in case the material is not collected directly from the patient but comes from a patient-related object, e.g. a catheter
Binding Description: (preferred): SNOMED CT, EMDN
... collectionProcedure 0..1 EHDSProcedure The procedure that collects the specimen.
... collectionProcedureMethod 0..1 CodeableConcept Collection procedure method
Binding Description: (preferred): SNOMED CT
... receivedDate 0..1 dateTime Date and time that the material is handed over at the laboratory or specimen collection centre.
... subject[x] 0..1 Subject
.... subjectEHDSPatient EHDSPatient
.... subjectEHDSPatientAnimal EHDSPatientAnimal
.... subjectEHDSLocation EHDSLocation
.... subjectEHDSDevice EHDSDevice
.... subjectEHDSSubstance EHDSSubstance
... container 0..* Base The container holding the specimen.
.... specimenQuantity 0..1 Quantity Specimen quantity
.... containerDevice 1..1 EHDSDevice Container device

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
EHDSSpecimen.typeOfSpeciespreferred
EHDSSpecimen.materialpreferred
EHDSSpecimen.morphologypreferred
EHDSSpecimen.sourceDevicepreferred
EHDSSpecimen.collectionProcedureMethodpreferred

This structure is derived from Base

Summary

Mandatory: 0 element(2 nested mandatory elements)

Key Elements View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. EHDSSpecimen 0..* Base Specimen model
Instances of this logical model can be the target of a Reference
... identifier 1..* Identifier An identifier of the specimen which is unique within in a defined scope.
... typeOfSpecies 0..1 CodeableConcept Biologic type of species for laboratory result reports bound to non-human subjects.
Binding Description: (preferred): SNOMED CT
... material 0..1 CodeableConcept Material that forms the specimen.
Binding Description: (preferred): SNOMED CT
... bodySite 0..1 EHDSBodyStructure Anatomic location (body location, laterality) where the material is collected, e.g. Elbow, left
... morphology 0..1 CodeableConcept Morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer.
Binding Description: (preferred): SNOMED CT
... sourceDevice 0..1 CodeableConcept Source device in case the material is not collected directly from the patient but comes from a patient-related object, e.g. a catheter
Binding Description: (preferred): SNOMED CT, EMDN
... collectionProcedure 0..1 EHDSProcedure The procedure that collects the specimen.
... collectionProcedureMethod 0..1 CodeableConcept Collection procedure method
Binding Description: (preferred): SNOMED CT
... receivedDate 0..1 dateTime Date and time that the material is handed over at the laboratory or specimen collection centre.
... subject[x] 0..1 Subject
.... subjectEHDSPatient EHDSPatient
.... subjectEHDSPatientAnimal EHDSPatientAnimal
.... subjectEHDSLocation EHDSLocation
.... subjectEHDSDevice EHDSDevice
.... subjectEHDSSubstance EHDSSubstance
... container 0..* Base The container holding the specimen.
.... specimenQuantity 0..1 Quantity Specimen quantity
.... containerDevice 1..1 EHDSDevice Container device

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
EHDSSpecimen.typeOfSpeciespreferred
EHDSSpecimen.materialpreferred
EHDSSpecimen.morphologypreferred
EHDSSpecimen.sourceDevicepreferred
EHDSSpecimen.collectionProcedureMethodpreferred

Differential View

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. EHDSSpecimen 0..* Base Specimen model
Instances of this logical model can be the target of a Reference
... identifier 1..* Identifier An identifier of the specimen which is unique within in a defined scope.
... typeOfSpecies 0..1 CodeableConcept Biologic type of species for laboratory result reports bound to non-human subjects.
Binding Description: (preferred): SNOMED CT
... material 0..1 CodeableConcept Material that forms the specimen.
Binding Description: (preferred): SNOMED CT
... bodySite 0..1 EHDSBodyStructure Anatomic location (body location, laterality) where the material is collected, e.g. Elbow, left
... morphology 0..1 CodeableConcept Morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer.
Binding Description: (preferred): SNOMED CT
... sourceDevice 0..1 CodeableConcept Source device in case the material is not collected directly from the patient but comes from a patient-related object, e.g. a catheter
Binding Description: (preferred): SNOMED CT, EMDN
... collectionProcedure 0..1 EHDSProcedure The procedure that collects the specimen.
... collectionProcedureMethod 0..1 CodeableConcept Collection procedure method
Binding Description: (preferred): SNOMED CT
... receivedDate 0..1 dateTime Date and time that the material is handed over at the laboratory or specimen collection centre.
... subject[x] 0..1 Subject
.... subjectEHDSPatient EHDSPatient
.... subjectEHDSPatientAnimal EHDSPatientAnimal
.... subjectEHDSLocation EHDSLocation
.... subjectEHDSDevice EHDSDevice
.... subjectEHDSSubstance EHDSSubstance
... container 0..* Base The container holding the specimen.
.... specimenQuantity 0..1 Quantity Specimen quantity
.... containerDevice 1..1 EHDSDevice Container device

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSetURI
EHDSSpecimen.typeOfSpeciespreferred
EHDSSpecimen.materialpreferred
EHDSSpecimen.morphologypreferred
EHDSSpecimen.sourceDevicepreferred
EHDSSpecimen.collectionProcedureMethodpreferred

Snapshot View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. EHDSSpecimen 0..* Base Specimen model
Instances of this logical model can be the target of a Reference
... identifier 1..* Identifier An identifier of the specimen which is unique within in a defined scope.
... typeOfSpecies 0..1 CodeableConcept Biologic type of species for laboratory result reports bound to non-human subjects.
Binding Description: (preferred): SNOMED CT
... material 0..1 CodeableConcept Material that forms the specimen.
Binding Description: (preferred): SNOMED CT
... bodySite 0..1 EHDSBodyStructure Anatomic location (body location, laterality) where the material is collected, e.g. Elbow, left
... morphology 0..1 CodeableConcept Morphological abnormalities of the anatomical location where the material is taken, for example wound, ulcer.
Binding Description: (preferred): SNOMED CT
... sourceDevice 0..1 CodeableConcept Source device in case the material is not collected directly from the patient but comes from a patient-related object, e.g. a catheter
Binding Description: (preferred): SNOMED CT, EMDN
... collectionProcedure 0..1 EHDSProcedure The procedure that collects the specimen.
... collectionProcedureMethod 0..1 CodeableConcept Collection procedure method
Binding Description: (preferred): SNOMED CT
... receivedDate 0..1 dateTime Date and time that the material is handed over at the laboratory or specimen collection centre.
... subject[x] 0..1 Subject
.... subjectEHDSPatient EHDSPatient
.... subjectEHDSPatientAnimal EHDSPatientAnimal
.... subjectEHDSLocation EHDSLocation
.... subjectEHDSDevice EHDSDevice
.... subjectEHDSSubstance EHDSSubstance
... container 0..* Base The container holding the specimen.
.... specimenQuantity 0..1 Quantity Specimen quantity
.... containerDevice 1..1 EHDSDevice Container device

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
EHDSSpecimen.typeOfSpeciespreferred
EHDSSpecimen.materialpreferred
EHDSSpecimen.morphologypreferred
EHDSSpecimen.sourceDevicepreferred
EHDSSpecimen.collectionProcedureMethodpreferred

This structure is derived from Base

Summary

Mandatory: 0 element(2 nested mandatory elements)

 

Other representations of profile: CSV, Excel